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Autologous Stem Cell (Bone Marrow) Transplant

Also known as Autologous Hematopoietic Cell Transplant, Autologous HCT, or Autologous BMT.

bone marrow medical illustration showing bone marrow, blood stem cells, platelets, red blood cells, and white blood cells

An autologous stem cell transplant uses your child’s own healthy blood-forming stem cells. Stem cells are made in the spongy part of bones, called bone marrow. They make all types of blood cells in your child’s body.

What is an autologous transplant?

An autologous transplant uses your child’s own blood-forming cells (stem cells) to replace cells that are damaged or destroyed by high doses of chemotherapy or radiation.

Before your child starts their high-dose therapy, the care team will collect some of your child’s own blood-forming stem cells. The stem cells are processed and frozen for later use.

After your child's stem cells are collected, they will receive chemotherapy or radiation to treat their disease.

After your child finishes their treatment, they will receive their own stem cells to replace blood cells destroyed by the treatment. The stem cells will travel to their bone marrow, where they will grow and make healthy red blood cells, platelets, and white blood cells. This is known as engraftment.

Learn about transplants using donor cells from other people:  allogeneic stem cell transplant.

Diseases autologous transplants treat

Autologous transplants are used for certain cancers and blood disorders, such as:

Steps of an autologous transplant

The autologous transplant process involves:

  1. Pre-collection testing and evaluation
  2. Collection of your child’s stem cells  
  3. Pre-transplant testing and evaluation
  4. Conditioning or preparative treatment using chemotherapy or radiation
  5. Infusion of your child’s stem cells
  6. Engraftment
  7. Supportive care to manage side effects

Risks of an autologous transplant

Patients receive their own cells, so there is no risk that the immune system will view the transplanted cells as foreign and attack or reject them. 

Side effects that may occur after an autologous transplant include:  

  • Side effects from chemotherapy or radiation therapy used during conditioning or as part of treatment  
  • Infection because of a low white blood cell count (neutropenia)  
  • Weakness or fatigue caused by fewer red blood cells (anemia)
  • Increased risk of bleeding or bruising caused by low platelets  (thrombocytopenia)
  • Graft failure if the cells do not grow well (this is very rare) 
  • The disease may come back (relapse) or get worse (progression) if the transplant is not successful.

Caring for your child after autologous transplant 

Your child will stay in the hospital until neutrophil engraftment occurs. A parent or adult family member will need to stay with your child while they are in the hospital. Your child will stay in local or long-term housing for several weeks to months after hospital discharge. After discharge, your child will have regular outpatient clinic visits and lab tests several times a week to check their progress. 

Your care team will teach you how to care for your child after transplant. It is good to have more than 1 family member who can be trained and available to help care for your child. 

To help your child recover and stay healthy after transplant:

  • Take steps to prevent infection. Your child will have a very weak immune system for weeks after the transplant. Avoid public areas, wash hands often, limit visitors, stay away from people who are sick, and wear a mask as instructed. 
  • Watch for signs of infection or illness. Call your doctor if your child develops a fever or symptoms such as rash, mouth sores, bruising or bleeding, trouble breathing, headache, or other changes in condition.
  • Give medicines as instructed. Let your care team know if your child has any problems taking medicines or keeping them down.
  • Follow your child’s mouth care plan.
  • Make sure your child has a daily bath as instructed by the care team.
  • Keep your home clean and prepare food safely.
  • Encourage your child to be active throughout the day if they feel well enough.
  • Avoid sun exposure when possible. Protect your child’s skin from the sun and use sunscreen with a SPF of 30 or higher.
  • Keep all medical appointments and contact your care team if you have any questions or concerns.

Questions to ask your care team

  • What are the benefits and risks of an autologous transplant for my child?
  • Are there any other treatment options?
  • How does an autologous transplant work?
  • What can I expect at each stage of the transplant?
  • How long will my child be in the hospital, and how should I prepare for it?
  • What signs of complications should I watch out for?
  • What are the short-term and long-term side effects of an autologous bone marrow transplant?
  • What monitoring and follow-up care will my child need after transplant?

Key points about autologous transplant

  • An autologous transplant uses your child’s own blood-forming stem cells.
  • Autologous transplant steps are pre-transplant testing and evaluation, stem cell collection, conditioning, infusion, and engraftment.
  • Blood-forming stem cells are usually collected from the blood. In some cases, the cells are taken from the bone marrow.
  • After the conditioning treatment, the cells are given back to the patient through an infusion.
  • The infused stem cells travel to the bone marrow and begin to divide to make new stem cells.
  • The blood-forming stem cells become white blood cells, platelets, and red blood cells.
  • Your care team can help you know if an autologous transplant is a good treatment option for your child and let you know what to expect. 


Reviewed: September 2025

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